The academic activities of JUIT commenced from July 2002 and currently offering undergraduate B. Tech degree programs in Bioinformatics, Biotechnology, Civil Engineering, Computer Science & Engineering, Electronics & Communication Engineering, Electronics & Computer Engineering and Information Technology.
Besides B. Tech programs, the university is presently offering M. Tech in Biotechnology, Biotechnology with specialization in Industrial Biotechnology and Medical Biotechnology, Civil Engineering with specialization in Structural Engineering, Construction Management and Environmental Engineering, Computer Science and Engineering, Computer Science and Engineering with specialization in Information Security and Data Science, Electronics and Communication Engineering, Electronics and Communication Engineering with specialization in Internet of Things. M Sc Programs are offered in Biotechnology, and Microbiology.